Protein ZmC3H29
ZmC3H29 is a protein in the C3H family.
Information
TF Name: ZmC3H29
Species: Maize
TF Family: C3H
Gene Name(Synonym): C3H29
Uniprot ID: B6SW16
Subgenome: 1

Protein ZmC3H29

ZmC3H29 is a protein in the C3H family.

Overview of domains present in v5 transcripts
PF00642PF18044
Zm00001eb227240_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d014705DAPseq no logo sequence fimo position
Zm00001d014705DAPseq no logo sequence fimo position
Zm00001d014705ChIPseq no logo sequence fimo position
Zm00001d014705PChIPseq no logo sequence fimo position

Interactions where ZmC3H29 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmC3H29 is the target  
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There are 61 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb227240_T001 from maize genome v5

Amino Acid Sequence
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MDRRQELCRNFQRGSCKYGSHCRFVHASSQQQQQAKPNPFGFGLGSRQQQQQQSSFRAQFQQQQQQKPNPFGFGVQGSAA
AQSRNAPGQAKPFQNKWVRDPSAPTKQQEAAQPPAAAHTSCTDPESCRQQIAEDFKNETPLWKLTCYAHLRSGPCDITGD
ISFEELRANAYEQGRQGHPLQSIVEGEKNLKNAKLTDFNNFLNTPRLSVSQTPSFPTVASFPEVKNNSAFGVSQNNGPPV
FSSFSQIGVTTNMGPGSRTTPGVPTNTLFGQSTQPSHPTFPAPTFGRSDMKFGVSGPFGSQISQQSSGTFQGSNMSSFGN
FSKPHASYQQSPSSSSHHRDIDRQSQDLLSGIVVPTSATNEAPVEDNKNENQDDSIWLKEKWSIGEIPLGEPPQRHVSHV
F

MDRRQELCRNFQRGSCKYGSHCRFVHASSQQQQQAKPNPFGFGLGSRQQQQQQSSFRAQFQQQQQQKPNPFGFGVQGSAA
AQSRNAPGQAKPFQNKWVRDPSAPTKQQEAAQPPAAAHTSCTDPESCRQQIAEDFKNETPLWKLTCYAHLRSGPCDITGD
ISFEELRANAYEQGRQGHPLQSIVEGEKNLKNAKLTDFNNFLNTPRLSVSQTPSFPTVASFPEVKNNSAFGVSQNNGPPV
FSSFSQIGVTTNMGPGSRTTPGVPTNTLFGQSTQPSHPTFPAPTFGRSDMKFGVSGPFGSQISQQSSGTFQGSNMSSFGN
FSKPHASYQQSPSSSSHHRDIDRQSQDLLSGIVVPTSATNEAPVEDNKNENQDDSIWLKEKWSIGEIPLGEPPQRHVSHV
F

MDRRQELCRNFQRGSCKYGSHCRFVHASSQQQQQAKPNPFGFGLGSRQQQQQQSSFRAQFQQQQQQKPNPFGFGVQGSAA
AQSRNAPGQAKPFQNKWVRDPSAPTKQQEAAQPPAAAHTSCTDPESCRQQIAEDFKNETPLWKLTCYAHLRSGPCDITGD
ISFEELRANAYEQGRQGHPLQSIVEGEKNLKNAKLTDFNNFLNTPRLSVSQTPSFPTVASFPEVKNNSAFGVSQNNGPPV
FSSFSQIGVTTNMGPGSRTTPGVPTNTLFGQSTQPSHPTFPAPTFGRSDMKFGVSGPFGSQISQQSSGTFQGSNMSSFGN
FSKPHASYQQSPSSSSHHRDIDRQSQDLLSGIVVPTSATNEAPVEDNKNENQDDSIWLKEKWSIGEIPLGEPPQRHVSHV
F

MDRRQELCRNFQRGSCKYGSHCRFVHASSQQQQQAKPNPFGFGLGSRQQQQQQSSFRAQFQQQQQQKPNPFGFGVQGSAA
AQSRNAPGQAKPFQNKWVRDPSAPTKQQEAAQPPAAAHTSCTDPESCRQQIAEDFKNETPLWKLTCYAHLRSGPCDITGD
ISFEELRANAYEQGRQGHPLQSIVEGEKNLKNAKLTDFNNFLNTPRLSVSQTPSFPTVASFPEVKNNSAFGVSQNNGPPV
FSSFSQIGVTTNMGPGSRTTPGVPTNTLFGQSTQPSHPTFPAPTFGRSDMKFGVSGPFGSQISQQSSGTFQGSNMSSFGN
FSKPHASYQQSPSSSSHHRDIDRQSQDLLSGIVVPTSATNEAPVEDNKNENQDDSIWLKEKWSIGEIPLGEPPQRHVSHV
F

MDRRQELCRNFQRGSCKYGSHCRFVHASSQQQQQAKPNPFGFGLGSRQQQQQQSSFRAQFQQQQQQKPNPFGFGVQGSAA
AQSRNAPGQAKPFQNKWVRDPSAPTKQQEAAQPPAAAHTSCTDPESCRQQIAEDFKNETPLWKLTCYAHLRSGPCDITGD
ISFEELRANAYEQGRQGHPLQSIVEGEKNLKNAKLTDFNNFLNTPRLSVSQTPSFPTVASFPEVKNNSAFGVSQNNGPPV
FSSFSQIGVTTNMGPGSRTTPGVPTNTLFGQSTQPSHPTFPAPTFGRSDMKFGVSGPFGSQISQQSSGTFQGSNMSSFGN
FSKPHASYQQSPSSSSHHRDIDRQSQDLLSGIVVPTSATNEAPVEDNKNENQDDSIWLKEKWSIGEIPLGEPPQRHVSHV
F

MDRRQELCRNFQRGSCKYGSHCRFVHASSQQQQQAKPNPFGFGLGSRQQQQQQSSFRAQFQQQQQQKPNPFGFGVQGSAA
AQSRNAPGQAKPFQNKWVRDPSAPTKQQEAAQPPAAAHTSCTDPESCRQQIAEDFKNETPLWKLTCYAHLRSGPCDITGD
ISFEELRANAYEQGRQGHPLQSIVEGEKNLKNAKLTDFNNFLNTPRLSVSQTPSFPTVASFPEVKNNSAFGVSQNNGPPV
FSSFSQIGVTTNMGPGSRTTPGVPTNTLFGQSTQPSHPTFPAPTFGRSDMKFGVSGPFGSQISQQSSGTFQGSNMSSFGN
FSKPHASYQQSPSSSSHHRDIDRQSQDLLSGIVVPTSATNEAPVEDNKNENQDDSIWLKEKWSIGEIPLGEPPQRHVSHV
F

MDRRQELCRNFQRGSCKYGSHCRFVHASSQQQQQAKPNPFGFGLGSRQQQQQQSSFRAQFQQQQQQKPNPFGFGVQGSAA
AQSRNAPGQAKPFQNKWVRDPSAPTKQQEAAQPPAAAHTSCTDPESCRQQIAEDFKNETPLWKLTCYAHLRSGPCDITGD
ISFEELRANAYEQGRQGHPLQSIVEGEKNLKNAKLTDFNNFLNTPRLSVSQTPSFPTVASFPEVKNNSAFGVSQNNGPPV
FSSFSQIGVTTNMGPGSRTTPGVPTNTLFGQSTQPSHPTFPAPTFGRSDMKFGVSGPFGSQISQQSSGTFQGSNMSSFGN
FSKPHASYQQSPSSSSHHRDIDRQSQDLLSGIVVPTSATNEAPVEDNKNENQDDSIWLKEKWSIGEIPLGEPPQRHVSHV
F

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00642
PF18044
PF00642
Hover here to show all domains

Nucleotide Sequence
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AGGCCGGATCTTTATCGGGCCTGCG...

GRMZM2G089050_T01 from maize genome v3


Related TFome: pUT3228

Amino Acid Sequence
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MDRRQELCRNFQRGSCKYGSHCRFVHASSQQQQQAKPNPFGFGLGSRQQQQQQSSFRAQFQQQQQQKPNPFGFGVQGSAA
AQSRNAPGQAKPFQNKWVRDPSAPTKQQEAAQPPAAAHTSCTDPESCRQQIAEDFKNETPLWKLTCYAHLRSGPCDITGD
ISFEELRANAYEQGRQGHPLQSIVEGEKNLKNAKLTDFNNFLNTPRLSVSQTPSFPTVASFPEVKNNSAFGVSQNNGPPV
FSSFSQIGVTTNMGPGSRTTPGVPTNTLFGQSTQPSHPTFPAPTFGRSDMKFGVSGPFGSQISQQSSGTFQGSNMSSFGN
FSKPHASYQQSPSSSSHHRDIDRQSQDLLSGIVVPTSATNEAPVEDNKNENQDDSIWLKEKWSIGEIPLGEPPQRHVSHV
F

Nucleotide Sequence
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AGGCCGGATCTTTATCGGGCCTGCG...

Zm00001d014705_T001 from maize genome v4

Amino Acid Sequence
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MDRRQELCRNFQRGSAAAQSRNAPGQAKPFQNKWVRDPSAPTKQQEAAQPPAAAHTSCTDPESCRQQIAEDFKNETPLWK
LTCYAHLRSGPCDITGDISFEELRANAYEQGRQGHPLQSIVEGEKNLKNAKLTDFNNFLNTPRLSVSQTPSFPTVASFPE
VKNNSAFGVSQNNGPPVFSSFSQIGVTTNMGPGSRTTPGVPTNTLFGQSTQPSHPTFPAPTFGRSDMKFGVSGPFGSQIS
QQSSGTFQGSNMSSFGNFSKPHASYQQSPSSSSHHRDIDRQSQDLLSGIVVPTSATNEAPVEDNKNENQDDSIWLKEKWS
IGEVHNHNTSNWGHKMHLKC

Nucleotide Sequence
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AGGCCGGATCTTTATCGGGCCTGCG...

Zm00001d014705_T002 from maize genome v4

Amino Acid Sequence
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MDRRQELCRNFQRGSCKYGSHCRFVHASSQQQQQAKPNPFGFGLGSRQQQQQQSSFRAQFQQQQQQKPNPFGFGVQGSAA
AQSRNAPGQAKPFQNKWVRDPSAPTKQQEAAQPPAAAHTSCTDPESCRQQIAEDFKNETPLWKLTCYAHLRSGPCDITGD
ISFEELRANAYEQGRQGHPLQSIVEGEKNLKNAKLTDFNNFLNTPRLSVSQTPSFPTVASFPEVKNNSAFGVSQNNGPPV
FSSFSQIGVTTNMGPGSRTTPGVPTNTLFGQSTQPSHPTFPAPTFGRSDMKFGVSGPFGSQISQQSSGTFQGSNMSSFGN
FSKPHASYQQSPSSSSHHRDIDRQSQDLLSGIVVPTSATNEAPVEDNKNENQDDSIWLKEKWSIGEIPLGEPPQRHVSHV
F

Nucleotide Sequence
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CCCGACTCCGACGGCGTCCGCCCGC...

Zm00001eb227240_T002 from maize genome v5

Amino Acid Sequence
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MLALGARTFCGFHSRPGWCSCKYGSHCRFVHASSQQQQQAKPNPFGFGVQGSAAAQSRNAPGQAKPFQNKWVRDPSAPTK
QQEAAQPPAAAHTSCTDPESCRQQIAEDFKNETPLWKLTCYAHLRSGPCDITGDISFEELRANAYEQGRQGHPLQSIVEG
EKNLKNAKLTDFNNFLNTPRLSVSQTPSFPTVASFPEVKNNSAFGVSQNNGPPVFSSFSQIGVTTNMGPGSRTTPGVPTN
TLFGQSTQPSHPTFPAPTFGRSDMKFGVSGPFGSQISQQSSGTFQGSNMSSFGNFSKPHASYQQSPSSSSHHRDIDRQSQ
DLLSGIVVPTSATNEAPVEDNKNENQDDSIWLKEKWSIGEIPLGEPPQRHVSHVF

Nucleotide Sequence
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TTCAGTCGTTATGCTCGCTCTGGGT...


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